Sequence Similarity Clusters for the Entities in PDB 1HCM

Entity #1 | Chains: A,B
CYTOCHROME CD1 NITRITE REDUCTASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 4196
95 % 13 13 2516 Flexibility: Low
Max RMSD: 6.7, Avg RMSD: 2.8
PDBFlex
90 % 13 13 2583
70 % 13 13 2572
50 % 14 23 1422
40 % 14 23 1405
30 % 14 23 1406

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1QKS 1 A, B CYTOCHROME CD1 NITRITE REDUCTASE 82367 1.7.2.1 | Details
2 1GQ1 1 A, B CYTOCHROME CD1 NITRITE REDUCTASE 82367 1.7.2.1 | Details
3 1HJ5 1 A, B Nitrite reductase 82367 1.7.2.1 | Details
4 1DY7 1 A, B NITRITE REDUCTASE 82367 1.7.2.1 | Details
5 1E2R 1 A, B NITRITE REDUCTASE 266 1.7.2.1 | Details
6 1HJ3 1 A, B Nitrite reductase 82367 1.7.2.1 | Details
7 1HJ4 1 A, B Nitrite reductase 82367 1.7.2.1 | Details
8 1AOQ 1 A, B NITRITE REDUCTASE 82367 1.7.2.1 | Details
9 1AOM 1 A, B NITRITE REDUCTASE 82367 1.7.2.1 | Details
10 1AOF 1 A, B NITRITE REDUCTASE 82367 1.7.2.1 | Details
11 1H9X 1 A, B CYTOCHROME CD1 NITRITE REDUCTASE 82367 1.7.2.1 | Details
12 1NIR 1 A, B NITRITE REDUCTASE EACH SUB-UNIT (A, B) LINKING ONE PHOSPHATE ION AND ONE CHLORIDE ION 287 1.7.2.1 | Details
13 1H9Y 1 A, B CYTOCHROME CD1 NITRITE REDUCTASE 82367 1.7.2.1 | Details
14 1HCM 1 A, B CYTOCHROME CD1 NITRITE REDUCTASE 82367 1.7.2.1 | Details
15 1NNO 1 A, B NITRITE REDUCTASE EACH SUBUNIT (A,B) LINKS ONE NITRIC OXIDE (NO) AT THE CATALYTIC SITE 287 1.7.2.1 | Details
16 1GJQ 1 A, B NITRITE REDUCTASE 287 1.7.2.1 | Details
17 1HZU 1 A NITRITE REDUCTASE 287 1.7.2.1 | Details
18 1N15 1 A, B NITRITE REDUCTASE MODEL WITHOUT ION AND WATER 287 1.7.2.1 | Details
19 1N90 1 A, B NITRITE REDUCTASE MODEL WITHOUT ION AND WATER 287 1.7.2.1 | Details
20 1N50 1 A, B NITRITE REDUCTASE MODEL WITHOUT ION AND WATER 287 1.7.2.1 | Details
21 1BL9 1 A, B NITRITE REDUCTASE D1 HEME OF SUBUNIT B HAS AN HYDROXIDE ION AS AN AXIAL LIGAND 287 1.7.2.1 | Details
22 5GUW 3 M, N Nitrite reductase cd1 nitrite reductase 287 1.7.2.1 | Details
23 1HZV 1 A NITRITE REDUCTASE 287 1.7.2.1 | Details