Sequence Similarity Clusters for the Entities in PDB 1HCM

Entity #1 | Chains: A,B
CYTOCHROME CD1 NITRITE REDUCTASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 3668
95 % 13 13 2171 Flexibility: Low
Max RMSD: 6.7, Avg RMSD: 2.8
PDBFlex
90 % 13 13 2228
70 % 13 13 2231
50 % 14 23 1251
40 % 14 23 1264
30 % 14 23 1243

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.