Sequence Similarity Clusters for the Entities in PDB 1HCG

Entity #1 | Chains: A
BLOOD COAGULATION FACTOR XA protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 47 119 211
95 % 59 134 250 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 59 134 265
70 % 59 135 292
50 % 531 678 14
40 % 1160 1685 4
30 % 1248 1834 6
Entity #2 | Chains: B
BLOOD COAGULATION FACTOR XA protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 32 66 498
95 % 32 66 688 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 32 66 715
70 % 32 66 767
50 % 32 67 801
40 % 67 118 458
30 % 67 118 457

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.