Sequence Similarity Clusters for the Entities in PDB 1HCF

Entity #1 | Chains: A,B
NEUROTROPHIN-4 protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 14397
95 % 2 3 13533
90 % 2 3 13287
70 % 2 3 12487
50 % 19 22 1357
40 % 19 22 1371
30 % 19 22 1347
Entity #2 | Chains: X,Y
BDNF/NT-3 GROWTH FACTORS RECEPTOR protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43178
95 % 2 2 22342
90 % 2 2 21645
70 % 2 2 19821
50 % 2 2 17233
40 % 4 5 7074
30 % 4 5 6250

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.