Sequence Similarity Clusters for the Entities in PDB 1HCF

Entity #1 | Chains: A,B
NEUROTROPHIN-4 protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 14783
95 % 2 3 13877
90 % 2 3 13625
70 % 2 3 12784
50 % 19 23 1254
40 % 19 23 1271
30 % 19 23 1244
Entity #2 | Chains: X,Y
BDNF/NT-3 GROWTH FACTORS RECEPTOR protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44341
95 % 2 2 22953
90 % 2 2 22231
70 % 2 2 20353
50 % 2 2 17678
40 % 4 5 7228
30 % 4 5 6378

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.