Sequence Similarity Clusters for the Entities in PDB 1HC8

Entity #1 | Chains: A,B
RIBOSOMAL PROTEIN L11 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 8365
95 % 1 7 8414 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 7 8341
70 % 1 7 8052
50 % 1 7 7385
40 % 3 12 4241
30 % 3 12 3828
Entity #2 | Chains: C,D
58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN rna, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures