Sequence Similarity Clusters for the Entities in PDB 1HC8

Entity #1 | Chains: A,B
RIBOSOMAL PROTEIN L11 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47169
95 % 1 7 7900 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 7 7857
70 % 1 7 7574
50 % 1 7 6980
40 % 1 7 6493
30 % 1 7 5788
Entity #2 | Chains: C,D
58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN rna, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.