Sequence Similarity Clusters for the Entities in PDB 1HBS

Entity #1 | Chains: A,C,E,G
HEMOGLOBIN S (DEOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 199 213 22
95 % 229 244 30 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 230 245 31
70 % 304 326 15
50 % 697 742 4
40 % 702 747 7
30 % 1133 1190 8
Entity #2 | Chains: B,D,F,H
HEMOGLOBIN S (DEOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 2519
95 % 230 244 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 235 249 19
70 % 318 340 13
50 % 698 742 4
40 % 703 747 7
30 % 1134 1190 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.