Sequence Similarity Clusters for the Entities in PDB 1HBR

Entity #1 | Chains: A,C
PROTEIN (HEMOGLOBIN D) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45503
95 % 1 1 34190
90 % 1 1 32658
70 % 4 4 13827
50 % 564 754 4
40 % 569 759 8
30 % 1008 1218 8
Entity #2 | Chains: B,D
PROTEIN (HEMOGLOBIN D) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45148
95 % 6 12 2411 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 8 17 1707
70 % 254 346 12
50 % 565 754 4
40 % 570 759 8
30 % 1009 1218 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures