Sequence Similarity Clusters for the Entities in PDB 1HBR

Entity #1 | Chains: A,C
PROTEIN (HEMOGLOBIN D) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30532
95 % 1 1 36706 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 35042
70 % 4 4 14411
50 % 565 755 4
40 % 570 760 7
30 % 1039 1299 6
Entity #2 | Chains: B,D
PROTEIN (HEMOGLOBIN D) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 3634
95 % 6 12 2452 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 8 17 1738
70 % 255 347 14
50 % 566 755 4
40 % 571 760 7
30 % 1040 1299 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures