Sequence Similarity Clusters for the Entities in PDB 1HBO

Entity #1 | Chains: A,D
METHYL-COENZYME M REDUCTASE I ALPHA SUBUNIT protein, length: 549 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 12 1793
95 % 14 15 1802
90 % 14 15 1840
70 % 15 21 1176
50 % 16 23 1107
40 % 16 23 1117
30 % 16 23 1102
Entity #2 | Chains: B,E
METHYL-COENZYME M REDUCTASE I BETA SUBUNIT protein, length: 442 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 14 1493
95 % 14 15 1815
90 % 14 15 1856
70 % 14 16 1734
50 % 16 23 1110
40 % 16 23 1121
30 % 16 23 1108
Entity #3 | Chains: C,F
METHYL-COENZYME M REDUCTASE I GAMMA SUBUNIT protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 14 1529
95 % 14 15 1860
90 % 14 15 1904
70 % 14 15 1921
50 % 16 22 1194
40 % 16 22 1207
30 % 16 22 1185

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.