Sequence Similarity Clusters for the Entities in PDB 1HBA

Entity #1 | Chains: A,C
HEMOGLOBIN ROTHSCHILD (DEOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 121 256 12
95 % 126 267 17 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.8
PDBFlex
90 % 126 267 19
70 % 144 334 17
50 % 348 759 4
40 % 353 764 7
30 % 799 1315 6
Entity #2 | Chains: B,D
HEMOGLOBIN ROTHSCHILD (DEOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 2678
95 % 128 253 20 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 131 258 20
70 % 159 349 14
50 % 349 759 4
40 % 354 764 7
30 % 800 1315 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures