Sequence Similarity Clusters for the Entities in PDB 1HBA

Entity #1 | Chains: A,C
HEMOGLOBIN ROTHSCHILD (DEOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 119 254 11
95 % 124 265 16 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 124 265 18
70 % 142 332 16
50 % 344 755 3
40 % 349 760 6
30 % 785 1299 6
Entity #2 | Chains: B,D
HEMOGLOBIN ROTHSCHILD (DEOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 2626
95 % 126 251 18 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 129 256 20
70 % 157 347 13
50 % 345 755 3
40 % 350 760 6
30 % 786 1299 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures