Sequence Similarity Clusters for the Entities in PDB 1HBA

Entity #1 | Chains: A,C
HEMOGLOBIN ROTHSCHILD (DEOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 122 258 12
95 % 127 269 17 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.8
PDBFlex
90 % 127 269 19
70 % 146 337 18
50 % 352 765 4
40 % 357 770 7
30 % 805 1323 6
Entity #2 | Chains: B,D
HEMOGLOBIN ROTHSCHILD (DEOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 2749
95 % 128 254 25 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 131 259 20
70 % 161 352 16
50 % 353 765 4
40 % 358 770 7
30 % 806 1323 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures