Sequence Similarity Clusters for the Entities in PDB 1HBA

Entity #1 | Chains: A,C
HEMOGLOBIN ROTHSCHILD (DEOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 103 222 22
95 % 118 250 20 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 119 251 21
70 % 142 332 16
50 % 344 754 4
40 % 349 759 8
30 % 764 1226 8
Entity #2 | Chains: B,D
HEMOGLOBIN ROTHSCHILD (DEOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45810
95 % 126 250 19 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 129 255 19
70 % 157 346 14
50 % 345 754 4
40 % 350 759 8
30 % 765 1226 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures