Sequence Similarity Clusters for the Entities in PDB 1HAV

Entity #1 | Chains: A
HEPATITIS A VIRUS 3C PROTEINASE protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10513
95 % 7 8 6426 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 7 8 6406
70 % 7 8 6256
50 % 7 8 5850
40 % 7 8 5478
30 % 7 8 4916
Entity #2 | Chains: B
HEPATITIS A VIRUS 3C PROTEINASE protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 10513
95 % 8 8 6426 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 8 8 6406
70 % 8 8 6256
50 % 8 8 5850
40 % 8 8 5478
30 % 8 8 4916

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures