Sequence Similarity Clusters for the Entities in PDB 1HAV

Entity #1 | Chains: A
HEPATITIS A VIRUS 3C PROTEINASE protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 11650
95 % 7 8 6774 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 7 8 6762
70 % 7 8 6555
50 % 7 8 6114
40 % 7 8 5683
30 % 7 8 5001
Entity #2 | Chains: B
HEPATITIS A VIRUS 3C PROTEINASE protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 11650
95 % 8 8 6774 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 8 8 6762
70 % 8 8 6555
50 % 8 8 6114
40 % 8 8 5683
30 % 8 8 5001

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures