Sequence Similarity Clusters for the Entities in PDB 1HAV

Entity #1 | Chains: A
HEPATITIS A VIRUS 3C PROTEINASE protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10368
95 % 7 8 6332 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 7 8 6314
70 % 7 8 6175
50 % 7 8 5772
40 % 7 8 5404
30 % 7 8 4852
Entity #2 | Chains: B
HEPATITIS A VIRUS 3C PROTEINASE protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 10368
95 % 8 8 6332 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 8 8 6314
70 % 8 8 6175
50 % 8 8 5772
40 % 8 8 5404
30 % 8 8 4852

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.