Sequence Similarity Clusters for the Entities in PDB 1HAP

Entity #1 | Chains: D
5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3' dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: L
Thrombin light chain protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 287 328 43
95 % 288 329 58
90 % 288 329 63
70 % 289 331 72
50 % 289 331 96
40 % 289 331 120
30 % 289 331 133
Entity #3 | Chains: H
Thrombin heavy chain protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 248 283 52
95 % 321 367 34
90 % 326 374 36
70 % 341 398 40
50 % 341 398 74
40 % 1409 1606 4
30 % 1524 1748 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.