Sequence Similarity Clusters for the Entities in PDB 1HA7

Entity #1 | Chains: A,C,E,G,I,K,M,O,Q,S,U,W
C-PHYCOCYANIN ALPHA CHAIN protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 4949
95 % 2 4 1192
90 % 2 7 728
70 % 15 30 372
50 % 15 36 388
40 % 22 45 283
30 % 52 120 122
Entity #2 | Chains: B,D,F,H,J,L,N,P,R,T,V,X
C-PHYCOCYANIN BETA CHAIN protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 4914
95 % 2 10 696
90 % 2 10 727
70 % 15 33 371
50 % 28 53 235
40 % 30 73 197
30 % 53 120 122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.