Sequence Similarity Clusters for the Entities in PDB 1HA7

Entity #1 | Chains: A,C,E,G,I,K,M,O,Q,S,U,W
C-PHYCOCYANIN ALPHA CHAIN protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 4846
95 % 2 4 1161
90 % 2 7 695
70 % 14 29 381
50 % 14 35 397
40 % 21 44 287
30 % 50 118 127
Entity #2 | Chains: B,D,F,H,J,L,N,P,R,T,V,X
C-PHYCOCYANIN BETA CHAIN protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 4812
95 % 2 10 664
90 % 2 10 694
70 % 14 32 379
50 % 27 52 231
40 % 29 72 194
30 % 51 118 127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.