Sequence Similarity Clusters for the Entities in PDB 1H9U

Entity #1 | Chains: A,B,C,D
RETINOID X RECEPTOR, BETA protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 5011
95 % 6 6 5325 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.6
PDBFlex
90 % 6 6 5355
70 % 75 81 306
50 % 75 81 369
40 % 85 94 313
30 % 1211 1254 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures