Sequence Similarity Clusters for the Entities in PDB 1H8Z

Entity #1 | Chains: A,B
BETA-LACTAMASE protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 14615
95 % 22 45 472 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 22 45 506
70 % 22 45 543
50 % 38 109 156
40 % 54 154 140
30 % 61 171 137

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5CTM 1 A, B Beta-lactamase 1408 3.5.2.6 | Details
2 5IY2 1 A, B Beta-lactamase OXA-143 470
3 4JF5 1 A Beta-lactamase 470 3.5.2.6 | Details
4 4K0W 1 A Beta-lactamase unp residues 31-273 470 3.5.2.6 | Details
5 5E2F 1 A, B Beta-lactamase YbxI acylated lysine 1423 3.5.2.6 | Details
6 4OH0 1 A Beta-lactamase OXA-58 470 3.5.2.6 | Details
7 5TG4 1 A Beta-lactamase 470 3.5.2.6 | Details
8 5CTN 1 A, B Beta-lactamase 1408 3.5.2.6 | Details
9 5MOZ 1 A, B Beta-lactamase OXA-10 287 3.5.2.6 | Details
10 2X02 1 A, B BETA-LACTAMASE OXA-10 287 3.5.2.6 | Details
11 1K55 1 A, B Beta lactamase OXA-10 RESIDUE 70 OF CHAINS A AND B, KCX ARE CARBAMYLATED LYSINE. 287 3.5.2.6 | Details
12 1K55 2 C, D Beta lactamase OXA-10 RESIDUE 70 OF CHAINS C AND D EXISTS IN TWO ALTERNATE CONFORMATIONS: KCX, CARBAMYLATED LYSINE, AND LYSINE. 287 3.5.2.6 | Details
13 4MLL 1 A, B, C, D Beta-lactamase OXA-1 UNP residues 26-276 562 3.5.2.6 | Details
14 5MOX 1 A, B Beta-lactamase OXA-10 287 3.5.2.6 | Details
15 3ISG 1 A, B Beta-lactamase OXA-1 UNP residues 26-276 562 3.5.2.6 | Details
16 4IED 1 A, B, C, D Class D beta-lactamase 851 3.5.2.6 | Details
17 5FQ9 1 A, B BETA-LACTAMASE OXA-10 1C BOUND TO THE ACTIVE SITE 287 3.5.2.6 | Details
18 5KZH 1 A, B, C, D Beta-lactamase 470 3.5.2.6 | Details
19 1M6K 1 A, B beta-lactamase OXA-1 562 3.5.2.6 | Details
20 5DTK 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
21 1K38 1 A, B Beta-lactamase OXA-2 90371 3.5.2.6 | Details
22 5MNU 1 A, B Beta-lactamase OXA-10 287 3.5.2.6 | Details
23 4K0X 1 A Beta-lactamase UNP residues 31-273 470 3.5.2.6 | Details
24 3QNC 1 A, B Oxacillinase SEE REMARK 999 562 3.5.2.6 | Details
25 1K4F 1 A, B Beta-lactamase PSE-2 287 3.5.2.6 | Details
26 4WZ5 1 A, B Beta-lactamase OXA-10 287 3.5.2.6 | Details
27 4WZ5 2 C, D Beta-lactamase OXA-10 287 3.5.2.6 | Details
28 1E3U 1 A, B, C BETA-LACTAMASE OXA-10 287 3.5.2.6 | Details
29 1E3U 2 D BETA-LACTAMASE OXA-10 287 3.5.2.6 | Details
30 5FAS 1 A, B Beta-lactamase 573 3.5.2.6 | Details
31 5QAD 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
32 1K54 1 A, B Beta lactamase OXA-10 Residue 70 is KCX, carbamylated lysine. Acylated at SER 67. 287 3.5.2.6 | Details
33 1K54 2 C, D Beta lactamase OXA-10 287 3.5.2.6 | Details
34 2WGW 1 A BETA-LACTAMASE OXA-10 287 3.5.2.6 | Details
35 2WGW 2 B BETA-LACTAMASE OXA-10 287 3.5.2.6 | Details
36 1K56 1 A, B, C OXA10 beta-lactamase Residue 70 of chains A and B are KCX are carbamylated lysine. Residue 70 of chain C exists in two alternate conformations: KCX, carbamylated lysine, and lysine. 287 3.5.2.6 | Details
37 1K56 2 D OXA10 beta-lactamase Residue 70, LYS, is non-carbamylated. 287 3.5.2.6 | Details
38 5QAV 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
39 4S2O 1 A, B Beta-lactamase OXA-10 287 3.5.2.6 | Details
40 5BOH 1 A Beta-lactamase 470 3.5.2.6 | Details
41 5QB2 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
42 5QAY 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
43 4S2P 1 A, B Beta-lactamase 573 3.5.2.6 | Details
44 2IWB 1 A METHICILLIN RESISTANCE MECR1 PROTEIN EXTRACELLULAR PENICILLIN-SENSOR DOMAIN, RESIDUES 340-585 1280
45 5QAU 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
46 5TG6 1 A Beta-lactamase 470
47 5TG5 1 A Beta-lactamase 470 3.5.2.6 | Details
48 5QA7 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
49 5QB1 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
50 5QAP 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
51 5L2F 1 A, B, C, D Beta-lactamase 470
52 5HAR 1 A Beta-lactamase UNP residues 25-261 550 3.5.2.6 | Details
53 4S2L 1 A, B Beta-lactamase residues 25-261 550 3.5.2.6 | Details
54 2WGV 1 A, B BETA-LACTAMASE OXA-10 287 3.5.2.6 | Details
55 5WI3 1 A, B OXA-239 1182652 3.5.2.6 | Details
56 1XA1 1 A, B, C, D Regulatory protein blaR1 C-terminal Domain (residues 331-585) 1280
57 5QAK 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
58 1XKZ 1 A, B, C, D Regulatory protein blaR1 sensor domain 1280
59 5QAI 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
60 5QAT 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
61 1H8Z 1 A, B BETA-LACTAMASE 287 3.5.2.6 | Details
62 5QA5 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
63 1E4D 1 A, B, C, D BETA-LACTAMASE OXA-10 287 3.5.2.6 | Details
64 5QAM 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
65 2RL3 1 A, B Beta-lactamase PSE-2 287 3.5.2.6 | Details
66 2WKH 1 A, B BETA-LACTAMASE OXA-10 RESIDUES 20-266 287 3.5.2.6 | Details
67 5MMY 1 A, B Beta-lactamase OXA-10 287 3.5.2.6 | Details
68 3Q7Z 1 A, B Beta-lactamase regulatory protein BlaR1 residues 332-583 1280
69 5WIB 1 A, B OXA-239 1182652 3.5.2.1 | Details
70 5QB0 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
71 5QA4 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
72 5QA6 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
73 1K57 1 A, B BETA LACTAMASE OXA-10 Residue 70, KCX, is CARBAMYLATED LYSINE 287 3.5.2.6 | Details
74 1K57 2 C, D BETA LACTAMASE OXA-10 Residue 70, LYS, is not CARBAMYLATED 287 3.5.2.6 | Details
75 3QNB 1 A, B, C, D Oxacillinase SEE REMARK 999 562 3.5.2.6 | Details
76 5QAA 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
77 5QAL 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
78 4ZDX 1 A Beta-lactamase 470
79 5FAQ 1 A, B Beta-lactamase 573 3.5.2.6 | Details
80 6B22 1 A Beta-lactamase UNP residues 32-275 470
81 5QAH 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
82 5VFD 1 A Beta-lactamase 470
83 5WI7 1 A, B OXA-239 1182652 3.5.2.6 | Details
84 5HAP 1 A, B Beta-lactamase UNP residues 25-265 573 3.5.2.6 | Details
85 5QA9 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
86 5ODZ 1 B, D Beta-lactamase N-terminal His-Tag cleaved off with TEV protease 550 3.5.2.6 | Details
87 5QAS 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
88 3ZNT 1 A BETA-LACTAMASE 470 3.5.2.6 | Details
89 5QAJ 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
90 5QB4 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
91 5QAC 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
92 1FOF 1 A, B BETA LACTAMASE OXA-10 287 3.5.2.6 | Details
93 5QAO 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
94 3LCE 1 A, B, C, D Beta-lactamase OXA-10 287 3.5.2.6 | Details
95 1H5X 1 A, B BETA-LACTAMASE ACYL-ENZYME COMPLEX 287 3.5.2.6 | Details
96 2X01 1 A, B BETA-LACTAMASE OXA-10 287 3.5.2.6 | Details
97 2WKI 1 A, B BETA-LACTAMASE OXA-10 287 3.5.2.6 | Details
98 3Q81 1 A, B Beta-lactamase regulatory protein BlaR1 residues 332-583 1280
99 5FAT 1 A, B Beta-lactamase 573 3.5.2.6 | Details
100 3G4P 1 A Beta-lactamase OXA-24 UNP RESIDUES 32-275 470 3.5.2.6 | Details
101 4S2N 1 A, B Beta-lactamase 573 3.5.2.6 | Details
102 4S2N 2 C, D Beta-lactamase 573 3.5.2.6 | Details
103 4X55 1 A, B Beta-lactamase OXA-225 470
104 3HBR 1 A, B, C, D OXA-48 573 3.5.2.6 | Details
105 3Q7V 1 A Beta-lactamase regulatory protein BlaR1 residues 332-583 1280
106 3Q7V 2 B Beta-lactamase regulatory protein BlaR1 residues 332-583 1280
107 4S2K 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
108 1K4E 1 A, B Beta-lactamase PSE-2 287 3.5.2.6 | Details
109 1K6S 1 A, B Beta-lactamase PSE-2 287 3.5.2.6 | Details
110 1H8Y 1 A, B BETA-LACTAMASE THERE IS AN ESTER LINK BETWEEN SER A 67 OG AND MER A 300 C7 AND BETWEEN SER B 67 OG AND MER B 300 C7 287 3.5.2.6 | Details
111 5QB3 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
112 3UY6 1 A, B Regulatory protein BlaR1 BlaR1 sensor domain 1280
113 3Q82 1 A, B Beta-lactamase regulatory protein BlaR1 residues 332-583 1280
114 5QAE 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
115 2IWC 1 A METHICILLIN RESISTANCE MECR1 PROTEIN THE FIRST THREE RESIDUES, GLY331, HIS332 AND MET333 ARE THE RESULT OF THE CLONING STRATEGY APPLIED AND DO NOT CORRESPOND TO THE CHEMICAL SEQUENCE OF THE PROTEIN. EXTRACELLULAR PENICILLIN-SENSOR DOMAIN, RESIDUES 334-585 1280
116 3PAE 1 A, B Beta-lactamase UNP residues 32-275 470 3.5.2.6 | Details
117 5OE0 1 A, B Beta-lactamase 573 3.5.2.6 | Details
118 2HP6 1 A, B Beta-lactamase PSE-2 287 3.5.2.6 | Details
119 5HAQ 1 A, B Beta-lactamase UNP residues 25-265 573 3.5.2.6 | Details
120 5HFO 1 A, B Beta-lactamase 562 3.5.2.6 | Details
121 3FV7 1 A Beta-lactamase OXA-24 residues 32-275 470 3.5.2.6 | Details
122 5QAB 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
123 5QAF 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
124 3FZC 1 A Beta-lactamase OXA-24 residues 32-275 470 3.5.2.6 | Details
125 5DTS 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
126 2HPB 1 A, B Beta-lactamase PSE-2 287 3.5.2.6 | Details
127 5DTT 1 A, B, C, D Beta-lactamase UNP residues 22-265 573 3.5.2.6 | Details
128 5FDH 1 A, B Beta-lactamase UNP residues 23-261 615 3.5.2.6 | Details
129 4JF4 1 A, B Beta-lactamase 470 3.5.2.6 | Details
130 5OE2 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
131 5QAR 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
132 5QAX 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
133 5QAW 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
134 4X56 1 A Class D beta-lactamase OXA-160 470
135 4Z9Q 1 A Beta-lactamase OXA-58 470 3.5.2.6 | Details
136 3PAG 1 A, B Beta-lactamase UNP residues 32-275 470 3.5.2.6 | Details
137 5QAZ 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
138 5QAN 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
139 3FYZ 1 A Beta-lactamase OXA-24 residues 32-275 470 3.5.2.6 | Details
140 4YIN 1 A, B Beta-lactamase residues 20-265 287 3.5.2.6 | Details
141 4X53 1 A Class D beta-lactamase OXA-160 470
142 4Y0T 1 A, B, C, D Beta-lactamase 470 3.5.2.6 | Details
143 4F94 1 A Beta-lactamase UNP residues 32-275 470 3.5.2.6 | Details
144 1K6R 1 A, B Beta-lactamase PSE-2 287 3.5.2.6 | Details
145 4WM9 1 A Beta-lactamase 470
146 5TG7 1 A Beta-lactamase 470 3.5.2.6 | Details
147 5QAQ 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
148 5QAG 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
149 1EWZ 1 A, B, C, D BETA LACTAMASE OXA-10 FULL LENGTH FUNCTIONAL ENZYME 287 3.5.2.6 | Details
150 4Y0O 1 A Beta-lactamase 470 3.5.2.6 | Details
151 2IWD 1 A Methicillin resistance mecR1 protein EXTRACELLULAR PENICILLIN-SENSOR DOMAIN, RESIDUES 340-585 1280
152 4WMC 1 A, B, C, F, G, H Beta-lactamase UNP residues 24-265 573 3.5.2.6 | Details
153 4WMC 2 D, E Beta-lactamase UNP residues 24-265 573 3.5.2.6 | Details
154 3MBZ 1 A Betalactamase OXA24 UNP residues 32-275 470 3.5.2.6 | Details
155 4S2J 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
156 2JC7 1 A BETA-LACTAMASE OXA-24 RESIDUES 32-275 470 3.5.2.6 | Details
157 3IF6 1 A OXA-46 oxacillinase 287
158 3IF6 2 B OXA-46 oxacillinase 287
159 3IF6 3 C OXA-46 oxacillinase 287
160 1NRF 1 A REGULATORY PROTEIN BLAR1 C-terminal domain 1402
161 1XA7 1 A, B Regulatory protein BlaR1 C-terminal Domain (residues 331-585) 1280
162 5QA8 1 A, B, C, D Beta-lactamase 573 3.5.2.6 | Details
163 2HP9 1 A, B Beta-lactamase PSE-2 287 3.5.2.6 | Details
164 4JF6 1 A Beta-lactamase 470 3.5.2.6 | Details
165 5DVA 1 A, B, C, D Beta-lactamase UNP Residues 22-265 573 3.5.2.6 | Details
166 4Y0U 1 A, B, C, D Beta-lactamase 470 3.5.2.6 | Details
167 2HP5 1 A, B, C, D Beta-lactamase PSE-2 287 3.5.2.6 | Details
168 2WGI 1 A, B BETA-LACTAMASE OXA-10 287 3.5.2.6 | Details
169 6GOA 1 A, B, C, D, E, F, G, H Beta-lactamase 573 3.5.2.6 | Details
170 4S2M 1 A, B, C, D Beta-lactamase residues 25-261 550 3.5.2.6 | Details
171 5OFT 1 A, B Beta-lactamase 573 3.5.2.6 | Details