Sequence Similarity Clusters for the Entities in PDB 1H8U

Entity #1 | Chains: A,B
EOSINOPHIL GRANULE MAJOR BASIC PROTEIN 1 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 24146
95 % 1 2 20620 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 2 20044
70 % 1 2 18426
50 % 1 2 15984
40 % 1 2 14232
30 % 1 2 12175

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures