Sequence Similarity Clusters for the Entities in PDB 1H8U

Entity #1 | Chains: A,B
EOSINOPHIL GRANULE MAJOR BASIC PROTEIN 1 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 24481
95 % 1 2 20888 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 2 20296
70 % 1 2 18647
50 % 1 2 16166
40 % 1 2 14387
30 % 1 2 12304

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures