Sequence Similarity Clusters for the Entities in PDB 1H8U

Entity #1 | Chains: A,B
EOSINOPHIL GRANULE MAJOR BASIC PROTEIN 1 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 23003
95 % 1 2 19670 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 2 19132
70 % 1 2 17645
50 % 1 2 15342
40 % 1 2 13676
30 % 1 2 11698

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.