Sequence Similarity Clusters for the Entities in PDB 1H8T

Entity #1 | Chains: A
ECHOVIRUS 11 COAT PROTEIN VP1 protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25167
95 % 1 3 21100
90 % 1 3 20521
70 % 2 7 9160
50 % 2 14 4198
40 % 43 148 281
30 % 43 148 285
Entity #2 | Chains: B
ECHOVIRUS 11 COAT PROTEIN VP2 protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25517
95 % 1 3 21340
90 % 1 3 20745
70 % 2 15 4105
50 % 41 150 299
40 % 41 150 316
30 % 54 178 170
Entity #3 | Chains: C
ECHOVIRUS 11 COAT PROTEIN VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25813
95 % 1 3 21547
90 % 1 3 20935
70 % 2 15 4114
50 % 28 114 430
40 % 43 159 262
30 % 57 189 152
Entity #4 | Chains: D
ECHOVIRUS 11 COAT PROTEIN VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 45957
95 % 1 8 9401
90 % 2 12 5781
70 % 18 82 571
50 % 36 116 426
40 % 36 116 466
30 % 36 116 456

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.