Sequence Similarity Clusters for the Entities in PDB 1H8T

Entity #1 | Chains: A
ECHOVIRUS 11 COAT PROTEIN VP1 protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25387
95 % 1 3 21288
90 % 1 3 20702
70 % 2 7 9245
50 % 2 14 4228
40 % 43 148 283
30 % 43 148 287
Entity #2 | Chains: B
ECHOVIRUS 11 COAT PROTEIN VP2 protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25742
95 % 1 3 21531
90 % 1 3 20929
70 % 2 15 4136
50 % 41 150 302
40 % 41 150 318
30 % 54 178 170
Entity #3 | Chains: C
ECHOVIRUS 11 COAT PROTEIN VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26042
95 % 1 3 21738
90 % 1 3 21119
70 % 2 15 4145
50 % 28 114 433
40 % 43 159 263
30 % 57 189 154
Entity #4 | Chains: D
ECHOVIRUS 11 COAT PROTEIN VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 46327
95 % 1 8 9504
90 % 2 12 5829
70 % 18 82 578
50 % 36 116 431
40 % 36 116 470
30 % 36 116 460

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.