Sequence Similarity Clusters for the Entities in PDB 1H8T

Entity #1 | Chains: A
ECHOVIRUS 11 COAT PROTEIN VP1 protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24626
95 % 1 3 20663
90 % 1 3 20096
70 % 2 7 8980
50 % 2 14 4109
40 % 43 147 270
30 % 43 147 275
Entity #2 | Chains: B
ECHOVIRUS 11 COAT PROTEIN VP2 protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24962
95 % 1 3 20895
90 % 1 3 20312
70 % 2 15 4019
50 % 41 150 286
40 % 41 150 304
30 % 54 178 163
Entity #3 | Chains: C
ECHOVIRUS 11 COAT PROTEIN VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25245
95 % 1 3 21091
90 % 1 3 20493
70 % 2 15 4028
50 % 28 114 414
40 % 43 158 253
30 % 56 188 148
Entity #4 | Chains: D
ECHOVIRUS 11 COAT PROTEIN VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 44912
95 % 1 8 9193
90 % 2 12 5642
70 % 18 82 532
50 % 36 116 409
40 % 36 116 445
30 % 36 116 439

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.