Sequence Similarity Clusters for the Entities in PDB 1H8P

Entity #1 | Chains: A,B
SEMINAL PLASMA PROTEIN PDC-109 protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41535
95 % 1 1 34944 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 33392
70 % 1 1 29772
50 % 1 1 25392
40 % 1 1 22291
30 % 1 1 18596

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures