Sequence Similarity Clusters for the Entities in PDB 1H8K

Entity #1 | Chains: A
SPECTRIN ALPHA CHAIN protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 16294
95 % 4 5 15500 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.2
PDBFlex
90 % 30 39 1455
70 % 31 43 1245
50 % 31 43 1306
40 % 156 313 113
30 % 195 398 76

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures