Sequence Similarity Clusters for the Entities in PDB 1H8H

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 33 297
95 % 18 41 314 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 18 41 327
70 % 25 62 178
50 % 28 77 180
40 % 28 77 190
30 % 28 77 213
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 40 249
95 % 19 42 316 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.0
PDBFlex
90 % 19 42 329
70 % 29 78 152
50 % 29 79 177
40 % 29 79 189
30 % 29 79 211
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 39 1161
95 % 17 39 1389 Flexibility: Medium
Max RMSD: 8.0, Avg RMSD: 3.3
PDBFlex
90 % 17 39 1408
70 % 18 41 1361
50 % 18 41 1404
40 % 26 68 682
30 % 26 68 685

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2JDI 3 G ATP SYNTHASE GAMMA CHAIN RESIDUES 26-298 9913 7.1.2.2 | Details
2 2CK3 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 7.1.2.2 | Details
3 1H8E 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
4 2V7Q 3 G ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 7.1.2.2 | Details
5 2JIZ 3 G, N ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 7.1.2.2 | Details
6 1W0J 3 G ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR 9913 7.1.2.2 | Details
7 2JJ2 3 G, N ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 7.1.2.2 | Details
8 1E79 3 G ATP SYNTHASE GAMMA CHAIN 9913 7.1.2.2 | Details
9 1E1R 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
10 3ZIA 3 G, Q ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
11 5IK2 3 G, O ATP synthase gamma chain 296745
12 2JJ1 3 G, N ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 7.1.2.2 | Details
13 3OEE 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
14 1E1Q 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
15 2HLD 3 G, P, Y ATP synthase gamma chain, mitochondrial 4932 7.1.2.2 | Details
16 1EFR 3 G BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT GAMMA 9913 7.1.2.2 | Details
17 1MAB 3 G PROTEIN (F1-ATPASE GAMMA CHAIN) GAMMA CHAIN 10116 7.1.2.2 | Details
18 4ASU 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913
19 5HKK 3 G, O ATP synthase gamma chain 296745
20 1NBM 4 G F1-ATPASE 9913 7.1.2.2 | Details
21 1W0K 3 G ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR 9913 7.1.2.2 | Details
22 1OHH 3 G ATP synthase subunit gamma, mitochondrial 9913
23 3OEH 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
24 2XOK 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
25 3OE7 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
26 1H8H 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
27 3OFN 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
28 4YXW 3 G ATP synthase subunit gamma, mitochondrial 9913
29 2WSS 3 G, P ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL HEART ISOFORM, RESIDUES 26-297 9913
30 4TSF 3 G ATP synthase subunit gamma, mitochondrial 9913
31 2QE7 3 G ATP synthase subunit gamma 90973 7.1.2.2 | Details
32 4TT3 3 G ATP synthase subunit gamma, mitochondrial 9913
33 3OAA 3 G, O, W, e ATP synthase gamma chain 562
34 4Z1M 3 G ATP synthase subunit gamma, mitochondrial 9913
35 1COW 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
36 3FKS 3 G, P, Y ATP synthase subunit gamma, mitochondrial UNP residues 34-311 4932 7.1.2.2 | Details
37 2F43 3 G ATP synthase gamma chain, mitochondrial 10116 7.1.2.2 | Details
38 2XND 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL RESIDUES 26-297 9913 7.1.2.2 | Details
39 5FL7 3 G ATP SYNTHASE SUBUNIT GAMMA CHAIN, MITOCHONDRIAL 4952 7.1.2.2 | Details
40 4XD7 3 G ATP synthase gamma chain 2334
41 2WPD 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
42 2W6J 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 7.1.2.2 | Details
43 5DN6 6 G ATP synthase gamma chain 266
44 2W6I 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 7.1.2.2 | Details
45 2W6H 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 7.1.2.2 | Details
46 2W6E 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 7.1.2.2 | Details
47 2W6G 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 7.1.2.2 | Details
48 3ZRY 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
49 2W6F 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 7.1.2.2 | Details
50 6CP3 5 G ATP synthase subunit gamma, mitochondrial 4932
51 6CP6 5 G ATP synthase subunit gamma, mitochondrial 4932
52 6B8H 13 G, j ATP synthase subunit gamma, mitochondrial 4932
53 5T4O 3 G ATP synthase gamma chain 562
54 5T4P 3 G ATP synthase gamma chain 562
55 5T4Q 3 G ATP synthase gamma chain 562
56 5LQX 7 G ATP synthase gamma subunit 870730
57 5LQY 7 G ATP synthase gamma subunit 870730
58 5LQZ 7 G ATP synthase gamma subunit 870730
59 5FIJ 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
60 5FIK 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
61 5FIL 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
62 5ARA 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
63 5ARE 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
64 5ARH 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
65 5ARI 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
66 4B2Q 5 G, g ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL RESIDUES 34-311 4932
67 1QO1 3 G ATP SYNTHASE GAMMA CHAIN THE BOS TAURUS (BOVINE) ATP SYNTHASE GAMMA CHAIN SEQUENCE (SWISSPROT P05631) AND MODEL (PDB ENTRY 1BMF) ARE GIVEN IN THE COORDINATES OF THIS ENTRY 4932 7.1.2.2 | Details
68 1BMF 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details