Sequence Similarity Clusters for the Entities in PDB 1H8H

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 33 332
95 % 18 41 326 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 18 41 337
70 % 25 62 184
50 % 28 81 179
40 % 28 81 192
30 % 28 81 213
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 40 258
95 % 19 42 327 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.0
PDBFlex
90 % 19 42 338
70 % 29 81 151
50 % 29 83 176
40 % 29 83 188
30 % 29 83 211
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 39 1194
95 % 17 39 1430 Flexibility: Medium
Max RMSD: 8.0, Avg RMSD: 3.3
PDBFlex
90 % 17 39 1450
70 % 18 41 1400
50 % 18 41 1434
40 % 26 72 664
30 % 26 72 669

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2JDI 3 G ATP SYNTHASE GAMMA CHAIN RESIDUES 26-298 9913 7.1.2.2 | Details
2 2CK3 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 7.1.2.2 | Details
3 1H8E 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
4 2V7Q 3 G ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 7.1.2.2 | Details
5 2JIZ 3 G, N ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 7.1.2.2 | Details
6 1W0J 3 G ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR 9913 7.1.2.2 | Details
7 2JJ2 3 G, N ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 7.1.2.2 | Details
8 1E79 3 G ATP SYNTHASE GAMMA CHAIN 9913 7.1.2.2 | Details
9 1E1R 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
10 3ZIA 3 G, Q ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
11 5IK2 3 G, O ATP synthase gamma chain 296745
12 2JJ1 3 G, N ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 7.1.2.2 | Details
13 3OEE 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
14 1E1Q 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
15 2HLD 3 G, P, Y ATP synthase gamma chain, mitochondrial 4932 7.1.2.2 | Details
16 1EFR 3 G BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT GAMMA 9913 7.1.2.2 | Details
17 1MAB 3 G PROTEIN (F1-ATPASE GAMMA CHAIN) GAMMA CHAIN 10116 7.1.2.2 | Details
18 4ASU 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913
19 5HKK 3 G, O ATP synthase gamma chain 296745
20 1NBM 4 G F1-ATPASE 9913 7.1.2.2 | Details
21 1W0K 3 G ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR 9913 7.1.2.2 | Details
22 1OHH 3 G ATP synthase subunit gamma, mitochondrial 9913
23 3OEH 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
24 2XOK 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
25 3OE7 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
26 1H8H 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
27 3OFN 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 7.1.2.2 | Details
28 4YXW 3 G ATP synthase subunit gamma, mitochondrial 9913
29 2WSS 3 G, P ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL HEART ISOFORM, RESIDUES 26-297 9913
30 4TSF 3 G ATP synthase subunit gamma, mitochondrial 9913
31 2QE7 3 G ATP synthase subunit gamma 90973 7.1.2.2 | Details
32 4TT3 3 G ATP synthase subunit gamma, mitochondrial 9913
33 3OAA 3 G, O, W, e ATP synthase gamma chain 562
34 4Z1M 3 G ATP synthase subunit gamma, mitochondrial 9913
35 1COW 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details
36 3FKS 3 G, P, Y ATP synthase subunit gamma, mitochondrial UNP residues 34-311 4932 7.1.2.2 | Details
37 2F43 3 G ATP synthase gamma chain, mitochondrial 10116 7.1.2.2 | Details
38 2XND 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL RESIDUES 26-297 9913 7.1.2.2 | Details
39 5FL7 3 G ATP SYNTHASE SUBUNIT GAMMA CHAIN, MITOCHONDRIAL 4952 7.1.2.2 | Details
40 4XD7 3 G ATP synthase gamma chain 2334
41 2WPD 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
42 2W6J 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 7.1.2.2 | Details
43 5DN6 6 G ATP synthase gamma chain 266
44 2W6I 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 7.1.2.2 | Details
45 6FOC 3 G ATP synthase gamma chain 1772
46 2W6H 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 7.1.2.2 | Details
47 2W6E 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 7.1.2.2 | Details
48 2W6G 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 7.1.2.2 | Details
49 3ZRY 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
50 2W6F 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 7.1.2.2 | Details
51 6N2Y 3 G ATP synthase gamma chain 2334
52 6N2Z 7 G ATP synthase gamma chain 2334
53 6N30 7 G ATP synthase gamma chain 2334
54 6CP3 5 G ATP synthase subunit gamma, mitochondrial 4932
55 6CP6 5 G ATP synthase subunit gamma, mitochondrial 4932
56 6B8H 13 G, j ATP synthase subunit gamma, mitochondrial 4932
57 5T4O 3 G ATP synthase gamma chain 562
58 5T4P 3 G ATP synthase gamma chain 562
59 5T4Q 3 G ATP synthase gamma chain 562
60 5LQX 7 G ATP synthase gamma subunit 870730
61 5LQY 7 G ATP synthase gamma subunit 870730
62 5LQZ 7 G ATP synthase gamma subunit 870730
63 5FIJ 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
64 5FIK 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
65 5FIL 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
66 5ARA 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
67 5ARE 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
68 5ARH 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
69 5ARI 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
70 4B2Q 5 G, g ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL RESIDUES 34-311 4932
71 1QO1 3 G ATP SYNTHASE GAMMA CHAIN THE BOS TAURUS (BOVINE) ATP SYNTHASE GAMMA CHAIN SEQUENCE (SWISSPROT P05631) AND MODEL (PDB ENTRY 1BMF) ARE GIVEN IN THE COORDINATES OF THIS ENTRY 4932 7.1.2.2 | Details
72 1BMF 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 7.1.2.2 | Details