Sequence Similarity Clusters for the Entities in PDB 1H8H

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 29 259
95 % 18 41 256
90 % 18 41 264
70 % 25 59 158
50 % 28 71 155
40 % 28 71 172
30 % 28 71 187
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 40 188
95 % 19 42 257
90 % 19 42 265
70 % 29 72 127
50 % 29 72 156
40 % 29 72 173
30 % 29 72 188
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 39 809
95 % 17 39 1108
90 % 17 39 1132
70 % 18 41 1118
50 % 18 41 1170
40 % 26 65 587
30 % 26 65 585

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.