Sequence Similarity Clusters for the Entities in PDB 1H8E

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 29 259
95 % 3 41 255
90 % 3 41 263
70 % 3 59 158
50 % 3 71 155
40 % 3 71 172
30 % 3 71 188
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 40 188
95 % 3 42 256
90 % 3 42 264
70 % 3 72 127
50 % 3 72 156
40 % 3 72 173
30 % 3 72 189
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 39 809
95 % 3 39 1111
90 % 3 39 1135
70 % 3 41 1119
50 % 3 41 1172
40 % 3 65 588
30 % 3 65 585
Entity #4 | Chains: H
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 15 3169
95 % 3 15 3907
90 % 3 15 3932
70 % 3 15 3861
50 % 3 15 3746
40 % 3 15 3596
30 % 3 29 1217
Entity #5 | Chains: I
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 19 2378
95 % 3 19 2995
90 % 3 19 3038
70 % 3 19 3014
50 % 3 19 2941
40 % 3 19 2867
30 % 3 19 2692

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.