Sequence Similarity Clusters for the Entities in PDB 1H8E

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 29 275
95 % 3 41 264
90 % 3 41 273
70 % 3 59 164
50 % 3 71 161
40 % 3 71 178
30 % 3 71 193
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 40 197
95 % 3 42 265
90 % 3 42 274
70 % 3 72 135
50 % 3 72 162
40 % 3 72 179
30 % 3 72 194
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 39 837
95 % 3 39 1142
90 % 3 39 1171
70 % 3 41 1145
50 % 3 41 1200
40 % 3 65 604
30 % 3 65 601
Entity #4 | Chains: H
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 15 3238
95 % 3 15 3989
90 % 3 15 4013
70 % 3 15 3940
50 % 3 15 3819
40 % 3 15 3663
30 % 3 29 1252
Entity #5 | Chains: I
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 19 2441
95 % 3 19 3060
90 % 3 19 3103
70 % 3 19 3074
50 % 3 19 2999
40 % 3 19 2934
30 % 3 19 2746

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.