Sequence Similarity Clusters for the Entities in PDB 1H80

Entity #1 | Chains: A,B
IOTA-CARRAGEENASE protein, length: 464 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 11443
95 % 1 3 11318 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 1 3 11166
70 % 1 3 10584
50 % 1 3 9560
40 % 1 3 8745
30 % 1 3 7702

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures