Sequence Similarity Clusters for the Entities in PDB 1H6K

Entity #1 | Chains: A,B,C
CBP80 protein, length: 757 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25964
95 % 1 9 3001 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 1 9 3042
70 % 1 9 3003
50 % 1 9 2957
40 % 1 9 2901
30 % 1 9 2718
Entity #2 | Chains: X,Y,Z
20 KDA NUCLEAR CAP BINDING PROTEIN protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30649
95 % 1 1 25353 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 24503
70 % 1 1 22249
50 % 1 1 19218
40 % 1 1 17102
30 % 1 1 14637

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures