Sequence Similarity Clusters for the Entities in PDB 1H6K

Entity #1 | Chains: A,B,C
CBP80 protein, length: 757 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25371
95 % 1 8 3053 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 1 8 3096
70 % 1 8 3067
50 % 1 8 3015
40 % 1 8 2968
30 % 1 8 2780
Entity #2 | Chains: X,Y,Z
20 KDA NUCLEAR CAP BINDING PROTEIN protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30004
95 % 1 1 24849 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 24032
70 % 1 1 21844
50 % 1 1 18895
40 % 1 1 16825
30 % 1 1 14409

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures