Sequence Similarity Clusters for the Entities in PDB 1H6E

Entity #1 | Chains: A
CLATHRIN COAT ASSEMBLY PROTEIN AP50 protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 10399
95 % 8 8 8995 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 8 8 8915
70 % 11 11 6214
50 % 11 11 5816
40 % 13 13 4026
30 % 13 13 3717
Entity #2 | Chains: P
CYTOTOXIC T-LYMPHOCYTE PROTEIN 4 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures