Sequence Similarity Clusters for the Entities in PDB 1H64

Entity #1 | Chains: 1,2,A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z
SNRNP SM-LIKE PROTEIN protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 1183
95 % 1 2 1409 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.4
PDBFlex
90 % 1 2 1432
70 % 1 2 1451
50 % 2 5 588
40 % 3 8 417
30 % 3 46 277

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1TH7 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N Small nuclear riboprotein protein 2287
2 5MKI 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N Like-Sm ribonucleoprotein core 2187
3 1H64 1 1, 2, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z SNRNP SM-LIKE PROTEIN 29292
4 4C92 3 C U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 RESIDUES 1-89 4932
5 4C92 5 E U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM5 RESIDUES 1-93 4932
6 4EMK 2 B U6 snRNA-associated Sm-like protein LSm6 4896
7 1I4K 1 1, 2, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z PUTATIVE SNRNP SM-LIKE PROTEIN 2234
8 3BW1 1 A, B U6 snRNA-associated Sm-like protein LSm3 4932
9 3SWN 3 B, E, Q, T U6 snRNA-associated Sm-like protein LSm6 4896
10 1M8V 2 A, B, C, D, E, F, G, H, I, J, K, L, M, N PUTATIVE SNRNP SM-LIKE PROTEIN 29292
11 6ASO 3 C U6 snRNA-associated Sm-like protein LSm3 4932
12 6ASO 5 E U6 snRNA-associated Sm-like protein LSm5 4932
13 5MKN 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, T, U, V, W, X, Y, Z, a, b, d Like-Sm ribonucleoprotein core 2187
14 4M7D 3 C, J U6 snRNA-associated Sm-like protein LSm3 4932
15 4M7D 5 E, L U6 snRNA-associated Sm-like protein LSm5 4932
16 1I5L 2 A, B, C, D, E, F, G, H, I, J, K, L, M, N PUTATIVE SNRNP SM-LIKE PROTEIN AF-SM1 2234
17 4EMG 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N Probable U6 snRNA-associated Sm-like protein LSm3 4896
18 4M7A 3 C, J U6 snRNA-associated Sm-like protein LSm3 4932
19 4M7A 5 E, L U6 snRNA-associated Sm-like protein LSm5 4932
20 4M78 3 C, J U6 snRNA-associated Sm-like protein LSm3 4932
21 4M78 5 E, L U6 snRNA-associated Sm-like protein LSm5 4932
22 4PJO 6 F, T, f, t Small nuclear ribonucleoprotein F 9606
23 5VSU 3 C U6 snRNA-associated Sm-like protein LSm3 4932
24 5VSU 5 E U6 snRNA-associated Sm-like protein LSm5 4932
25 4M77 3 C, J U6 snRNA-associated Sm-like protein LSm3 4932
26 4M77 5 E, L U6 snRNA-associated Sm-like protein LSm5 4932
27 4M75 3 C, J U6 snRNA-associated Sm-like protein Lsm3 4932
28 4M75 5 E, L U6 snRNA-associated Sm-like protein Lsm5 4932
29 4N0A 1 A, B, E, F U6 snRNA-associated Sm-like protein LSm3 4932
30 4C8Q 3 C U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 RESIDUES 1-89 4932
31 4C8Q 5 E U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM5 RESIDUES 1-93 4932
32 6AHD 38 x U6 snRNA-associated Sm-like protein LSm6 9606
33 6AH0 16 x U6 snRNA-associated Sm-like protein LSm6 9606
34 5ZWM 11 r U6 snRNA-associated Sm-like protein LSm3 4932
35 5ZWM 13 t U6 snRNA-associated Sm-like protein LSm5 4932
36 5ZWO 11 r U6 snRNA-associated Sm-like protein LSm3 4932
37 5ZWO 13 t U6 snRNA-associated Sm-like protein LSm5 4932
38 5O9Z 30 s U6 snRNA-associated Sm-like protein LSm6 9606
39 5NRL 2 3 U6 snRNA-associated Sm-like protein LSm3 U6 snRNA-associated Sm-like protein LSm3 4932
40 5NRL 43 o U6 snRNA-associated Sm-like protein LSm5 U6 snRNA-associated Sm-like protein LSm5 4932
41 3JCR 16 6 LSm6 9606
42 3JCM 19 d U6 snRNA-associated Sm-like protein LSm3 4932
43 3JCM 21 f U6 snRNA-associated Sm-like protein LSm5 4932
44 5GAN 22 3 U6 snRNA-associated Sm-like protein LSm3 4932
45 5GAN 24 5 U6 snRNA-associated Sm-like protein LSm5 4932
46 3JB9 9 I, n Small nuclear ribonucleoprotein F 4896