Sequence Similarity Clusters for the Entities in PDB 1H5B

Entity #1 | Chains: A
MURINE T CELL RECEPTOR (TCR) VALPHA DOMAIN protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66752
95 % 1 3 19733 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.7
PDBFlex
90 % 1 3 19190
70 % 1 3 17693
50 % 1 3 15383
40 % 285 887 5
30 % 323 1013 7
Entity #2 | Chains: B,D
MURINE T CELL RECEPTOR (TCR) VALPHA DOMAIN protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45306
95 % 2 3 19733 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.7
PDBFlex
90 % 2 3 19190
70 % 2 3 17693
50 % 2 3 15383
40 % 286 887 5
30 % 324 1013 7
Entity #3 | Chains: C
MURINE T CELL RECEPTOR (TCR) VALPHA DOMAIN protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66753
95 % 3 3 19733 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.7
PDBFlex
90 % 3 3 19190
70 % 3 3 17693
50 % 3 3 15383
40 % 287 887 5
30 % 325 1013 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.