Sequence Similarity Clusters for the Entities in PDB 1H5B

Entity #1 | Chains: A
MURINE T CELL RECEPTOR (TCR) VALPHA DOMAIN protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 69198
95 % 1 3 20540 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.7
PDBFlex
90 % 1 3 19969
70 % 1 3 18357
50 % 1 3 15934
40 % 302 936 5
30 % 341 1065 7
Entity #2 | Chains: B,D
MURINE T CELL RECEPTOR (TCR) VALPHA DOMAIN protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46967
95 % 2 3 20540
90 % 2 3 19969
70 % 2 3 18357
50 % 2 3 15934
40 % 303 936 5
30 % 342 1065 7
Entity #3 | Chains: C
MURINE T CELL RECEPTOR (TCR) VALPHA DOMAIN protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 69199
95 % 3 3 20540 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.7
PDBFlex
90 % 3 3 19969
70 % 3 3 18357
50 % 3 3 15934
40 % 304 936 5
30 % 343 1065 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures