Sequence Similarity Clusters for the Entities in PDB 1H4Q

Entity #1 | Chains: A,B
PROLYL-TRNA SYNTHETASE protein, length: 477 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 4594
95 % 4 4 5384 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 4 4 5405
70 % 4 4 5329
50 % 4 4 5065
40 % 21 22 1408
30 % 22 23 1328
Entity #2 | Chains: T
TRNAPRO(CGG) rna, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.