Sequence Similarity Clusters for the Entities in PDB 1H4L

Entity #1 | Chains: A,B
CELL DIVISION PROTEIN KINASE 5 protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35748
95 % 6 6 5439 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 6 6 5455
70 % 6 6 5375
50 % 382 404 55
40 % 411 460 41
30 % 3261 3751 2
Entity #2 | Chains: D,E
CYCLIN-DEPENDENT KINASE 5 ACTIVATOR protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 21927
95 % 2 2 18905 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 2 2 18406
70 % 2 2 17036
50 % 2 2 14830
40 % 2 2 13200
30 % 2 2 11295

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.