Sequence Similarity Clusters for the Entities in PDB 1H4L

Entity #1 | Chains: A,B
CELL DIVISION PROTEIN KINASE 5 protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36886
95 % 6 6 5645 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 6 6 5662
70 % 6 6 5563
50 % 382 404 65
40 % 411 460 49
30 % 3379 3886 2
Entity #2 | Chains: D,E
CYCLIN-DEPENDENT KINASE 5 ACTIVATOR protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22663
95 % 2 2 19545 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 2 2 19032
70 % 2 2 17552
50 % 2 2 15253
40 % 2 2 13577
30 % 2 2 11622

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.