Sequence Similarity Clusters for the Entities in PDB 1H3P

Entity #1 | Chains: H
ANTIBODY FAB FRAGMENT protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62045
95 % 1 1 43534
90 % 1 1 41437
70 % 1412 2424 2
50 % 2921 5011 1
40 % 2921 5011 1
30 % 3397 5941 1
Entity #2 | Chains: L
ANTIBODY FAB FRAGMENT protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60724
95 % 44 62 452 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.7
PDBFlex
90 % 53 84 308
70 % 1433 2474 1
50 % 2922 5011 1
40 % 2922 5011 1
30 % 3398 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures