Sequence Similarity Clusters for the Entities in PDB 1H3O

Entity #1 | Chains: A,C
TRANSCRIPTION INITIATION FACTOR TFIID 135 KDA SUBUNIT protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46495
95 % 1 1 34737 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 33223
70 % 1 1 29623
50 % 1 1 25380
40 % 1 1 22398
30 % 1 1 18972
Entity #2 | Chains: B,D
TRANSCRIPTION INITIATION FACTOR TFIID 20/15 KDA SUBUNITS protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46456
95 % 1 1 34720 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 33206
70 % 1 1 29609
50 % 1 1 25369
40 % 1 1 22387
30 % 1 1 18959

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.