Sequence Similarity Clusters for the Entities in PDB 1H3L

Entity #1 | Chains: A,B
RNA POLYMERASE SIGMA FACTOR protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45528
95 % 1 1 37955 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 36191
70 % 1 1 32653
50 % 1 1 27763
40 % 1 1 24333
30 % 1 1 20282

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1H3L 1 A, B RNA POLYMERASE SIGMA FACTOR N-TERMINAL DOMAIN, RESIDUES 23-109 1902