Sequence Similarity Clusters for the Entities in PDB 1H3L

Entity #1 | Chains: A,B
RNA POLYMERASE SIGMA FACTOR protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45849
95 % 1 1 38237 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 36466
70 % 1 1 32904
50 % 1 1 27978
40 % 1 1 24531
30 % 1 1 20451

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures