Sequence Similarity Clusters for the Entities in PDB 1H3L

Entity #1 | Chains: A,B
RNA POLYMERASE SIGMA FACTOR protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46777
95 % 1 1 38965 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 37138
70 % 1 1 33479
50 % 1 1 28475
40 % 1 1 24964
30 % 1 1 20801

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures