Sequence Similarity Clusters for the Entities in PDB 1H3L

Entity #1 | Chains: A,B
RNA POLYMERASE SIGMA FACTOR protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45169
95 % 1 1 37672 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 35942
70 % 1 1 32455
50 % 1 1 27587
40 % 1 1 24182
30 % 1 1 20151

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures