Sequence Similarity Clusters for the Entities in PDB 1H31

Entity #1 | Chains: A,C,E,G
DIHEME CYTOCHROME C protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 6586
95 % 4 4 7207 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 4 4 7193
70 % 4 4 6999
50 % 5 5 4635
40 % 5 5 4397
30 % 5 5 4054
Entity #2 | Chains: B,D,F,H
CYTOCHROME C protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 6922
95 % 4 4 7514 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 4 4 7474
70 % 4 4 7267
50 % 4 4 6705
40 % 5 5 4502
30 % 5 5 4140

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures