Sequence Similarity Clusters for the Entities in PDB 1H2V

Entity #1 | Chains: C
80 KDA NUCLEAR CAP BINDING PROTEIN protein, length: 771 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50125
95 % 2 8 3004 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 2 8 3053
70 % 2 8 3022
50 % 2 8 2971
40 % 2 8 2932
30 % 2 8 2745
Entity #2 | Chains: Z
20 KDA NUCLEAR CAP BINDING PROTEIN protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 2545
95 % 1 9 3190 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 0.9
PDBFlex
90 % 1 9 3236
70 % 1 9 3196
50 % 1 9 3119
40 % 1 9 3040
30 % 1 9 2851

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.