Sequence Similarity Clusters for the Entities in PDB 1H2T

Entity #1 | Chains: C
80 KDA NUCLEAR CAP BINDING PROTEIN protein, length: 723 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25116
95 % 1 2 21411 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 2 20806
70 % 1 2 19106
50 % 1 2 16610
40 % 1 2 14831
30 % 1 2 12728
Entity #2 | Chains: Z
20 KDA NUCLEAR CAP BINDING PROTEIN protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 2572
95 % 4 9 3213 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 0.9
PDBFlex
90 % 4 9 3259
70 % 4 9 3220
50 % 4 9 3135
40 % 4 9 3053
30 % 4 9 2863

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures