Sequence Similarity Clusters for the Entities in PDB 1H2T

Entity #1 | Chains: C
80 KDA NUCLEAR CAP BINDING PROTEIN protein, length: 723 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 24773
95 % 1 2 21139 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 2 20543
70 % 1 2 18864
50 % 1 2 16414
40 % 1 2 14661
30 % 1 2 12577
Entity #2 | Chains: Z
20 KDA NUCLEAR CAP BINDING PROTEIN protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 9315
95 % 4 7 9487 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.0
PDBFlex
90 % 4 7 9386
70 % 4 7 8980
50 % 4 7 8109
40 % 4 7 7438
30 % 4 7 6568

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.