Sequence Similarity Clusters for the Entities in PDB 1H2R

Entity #1 | Chains: S
PROTEIN (PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT) protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 17 2925
95 % 17 17 3647 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 17 17 3701
70 % 17 18 3224
50 % 24 47 487
40 % 28 59 443
30 % 28 59 443
Entity #2 | Chains: L
PROTEIN (PERIPLASMIC [NIFE] HYDROGENASE LARGE SUBUNIT) protein, length: 534 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 30640
95 % 17 18 3298 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 17 18 3351
70 % 17 18 3311
50 % 21 42 557
40 % 35 64 400
30 % 44 82 321

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.