Sequence Similarity Clusters for the Entities in PDB 1H2R

Entity #1 | Chains: S
PROTEIN (PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT) protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 17 2971
95 % 17 17 3699 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 17 17 3750
70 % 17 18 3273
50 % 24 47 491
40 % 28 59 451
30 % 28 59 452
Entity #2 | Chains: L
PROTEIN (PERIPLASMIC [NIFE] HYDROGENASE LARGE SUBUNIT) protein, length: 534 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 31207
95 % 17 18 3352
90 % 17 18 3403
70 % 17 18 3379
50 % 21 42 565
40 % 36 65 398
30 % 45 83 321

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.