Sequence Similarity Clusters for the Entities in PDB 1H2M

Entity #1 | Chains: A
FACTOR INHIBITING HIF1 protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 31 1334
95 % 23 38 1391 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 23 38 1413
70 % 23 38 1428
50 % 23 38 1485
40 % 23 38 1498
30 % 23 38 1472
Entity #2 | Chains: S
HYPOXIA-INDUCIBLE FACTOR 1 ALPHA protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 48858
95 % 1 2 36500
90 % 1 2 34863
70 % 1 2 31007
50 % 1 2 26518
40 % 1 2 23421
30 % 1 2 19893

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.