Sequence Similarity Clusters for the Entities in PDB 1H2M

Entity #1 | Chains: A
FACTOR INHIBITING HIF1 protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 28 1458
95 % 21 35 1469 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 21 35 1496
70 % 21 35 1525
50 % 21 35 1564
40 % 21 35 1589
30 % 21 35 1562
Entity #2 | Chains: S
HYPOXIA-INDUCIBLE FACTOR 1 ALPHA protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 47303
95 % 1 2 35345
90 % 1 2 33794
70 % 1 2 30135
50 % 1 2 25827
40 % 1 2 22821
30 % 1 2 19367

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.