Sequence Similarity Clusters for the Entities in PDB 1H2L

Entity #1 | Chains: A
FACTOR INHIBITING HIF1 protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 31 1398
95 % 5 38 1447 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 5 38 1471
70 % 5 38 1475
50 % 5 38 1538
40 % 5 38 1541
30 % 5 38 1520
Entity #2 | Chains: S
HYPOXIA-INDUCIBLE FACTOR 1 ALPHA protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 25548
95 % 2 4 21753 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 2 4 21117
70 % 2 4 19379
50 % 2 4 16815
40 % 2 4 14983
30 % 2 4 12831

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures