Sequence Similarity Clusters for the Entities in PDB 1H2K

Entity #1 | Chains: A
FACTOR INHIBITING HIF1 protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 37 1271
95 % 2 38 1478
90 % 2 38 1503
70 % 2 38 1514
50 % 2 38 1567
40 % 2 38 1563
30 % 2 38 1547
Entity #2 | Chains: S
HYPOXIA-INDUCIBLE FACTOR 1 ALPHA protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 21205
95 % 1 4 19097 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 4 18590
70 % 1 4 17114
50 % 1 4 14924
40 % 1 4 13287
30 % 1 4 11173

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures