Sequence Similarity Clusters for the Entities in PDB 1H2K

Entity #1 | Chains: A
FACTOR INHIBITING HIF1 protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 31 1334
95 % 2 38 1393
90 % 2 38 1415
70 % 2 38 1430
50 % 2 38 1486
40 % 2 38 1498
30 % 2 38 1473
Entity #2 | Chains: S
HYPOXIA-INDUCIBLE FACTOR 1 ALPHA protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 24630
95 % 1 4 21030 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 4 20448
70 % 1 4 18763
50 % 1 4 16309
40 % 1 4 14552
30 % 1 4 12464

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.