Sequence Similarity Clusters for the Entities in PDB 1H2A

Entity #1 | Chains: S
HYDROGENASE protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60550
95 % 1 1 49402
90 % 1 1 46889
70 % 1 1 41104
50 % 1 1 34873
40 % 7 7 8534
30 % 7 7 7378
Entity #2 | Chains: L
HYDROGENASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60549
95 % 22 22 2972 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 22 22 3025
70 % 22 22 2980
50 % 55 73 388
40 % 57 76 399
30 % 74 102 281

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures