Sequence Similarity Clusters for the Entities in PDB 1H2A

Entity #1 | Chains: S
HYDROGENASE protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57344
95 % 1 1 41173
90 % 1 1 39292
70 % 1 1 34857
50 % 1 1 29753
40 % 7 7 8297
30 % 7 7 7313
Entity #2 | Chains: L
HYDROGENASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 32516
95 % 18 18 3513 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 18 18 3580
70 % 18 18 3541
50 % 27 42 592
40 % 53 71 405
30 % 70 89 319

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures