Sequence Similarity Clusters for the Entities in PDB 1H29

Entity #1 | Chains: A,B,C,D
HIGH-MOLECULAR-WEIGHT CYTOCHROME C protein, length: 514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14280
95 % 3 3 13407 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 3 3 13179
70 % 3 3 12369
50 % 3 4 9429
40 % 4 5 7742
30 % 4 5 6708

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures