Sequence Similarity Clusters for the Entities in PDB 1H28

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 355 361 21
95 % 370 376 32 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 370 376 34
70 % 370 376 42
50 % 393 401 55
40 % 433 457 41
30 % 3473 3732 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 82 86 158
95 % 101 105 146 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 105 109 151
70 % 105 109 172
50 % 105 109 202
40 % 105 109 225
30 % 110 115 223
Entity #3 | Chains: E,F
RETINOBLASTOMA-LIKE PROTEIN 1 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.