Sequence Similarity Clusters for the Entities in PDB 1H28

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 356 364 21
95 % 371 379 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 371 379 36
70 % 371 379 43
50 % 394 404 65
40 % 434 460 48
30 % 3611 3879 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 82 86 163
95 % 101 105 149 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 105 109 156
70 % 105 109 173
50 % 105 109 214
40 % 105 109 235
30 % 110 115 233
Entity #3 | Chains: E,F
RETINOBLASTOMA-LIKE PROTEIN 1 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.