Sequence Similarity Clusters for the Entities in PDB 1H27

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 276 364 21
95 % 285 379 32 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 285 379 34
70 % 285 379 41
50 % 299 404 55
40 % 310 460 43
30 % 2186 3777 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 29 86 160
95 % 42 105 148 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 46 109 154
70 % 46 109 172
50 % 46 109 205
40 % 46 109 229
30 % 49 115 228
Entity #3 | Chains: E
CYCLIN-DEPENDENT KINASE INHIBITOR 1B protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.