Sequence Similarity Clusters for the Entities in PDB 1H1R

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 244 364 26
95 % 249 380 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 249 380 38
70 % 249 380 45
50 % 259 430 51
40 % 262 462 52
30 % 1845 4118 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 83 181
95 % 25 105 154 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 28 109 160
70 % 28 109 177
50 % 28 109 219
40 % 28 109 243
30 % 29 115 253

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures