Sequence Similarity Clusters for the Entities in PDB 1H15

Entity #1 | Chains: A,D
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN protein, length: 182 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 65 69 231
95 % 72 76 306
90 % 87 92 237
70 % 87 92 269
50 % 133 142 180
40 % 133 142 193
30 % 277 296 100
Entity #2 | Chains: B,E
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR BETA 1 CHAIN protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 6788
95 % 4 4 7318
90 % 70 73 333
70 % 124 133 166
50 % 133 142 179
40 % 133 142 192
30 % 278 296 100
Entity #3 | Chains: C,F
DNA POLYMERASE protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.