Sequence Similarity Clusters for the Entities in PDB 1GZW

Entity #1 | Chains: A
GALECTIN-1 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 17 1260
95 % 11 28 1180 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.9
PDBFlex
90 % 12 34 800
70 % 12 38 687
50 % 13 43 627
40 % 24 61 437
30 % 104 221 134
Entity #2 | Chains: B
GALECTIN-1 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 17 1260
95 % 12 28 1180 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.9
PDBFlex
90 % 13 34 800
70 % 13 38 687
50 % 14 43 627
40 % 25 61 437
30 % 105 221 134

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures