Sequence Similarity Clusters for the Entities in PDB 1GZW

Entity #1 | Chains: A
GALECTIN-1 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 15 1436
95 % 9 26 1259 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.9
PDBFlex
90 % 10 32 840
70 % 10 36 703
50 % 11 41 650
40 % 22 59 430
30 % 89 198 139
Entity #2 | Chains: B
GALECTIN-1 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 15 1436
95 % 10 26 1259 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.9
PDBFlex
90 % 11 32 840
70 % 11 36 703
50 % 12 41 650
40 % 23 59 430
30 % 90 198 139

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.