Sequence Similarity Clusters for the Entities in PDB 1GZW

Entity #1 | Chains: A
GALECTIN-1 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 26 1048
95 % 11 28 1210 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.9
PDBFlex
90 % 11 28 1233
70 % 12 38 687
50 % 13 43 630
40 % 24 61 444
30 % 107 230 136
Entity #2 | Chains: B
GALECTIN-1 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 26 1048
95 % 12 28 1210 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.9
PDBFlex
90 % 12 28 1233
70 % 13 38 687
50 % 14 43 630
40 % 25 61 444
30 % 108 230 136

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures