Sequence Similarity Clusters for the Entities in PDB 1GZQ

Entity #1 | Chains: A
T-CELL SURFACE GLYCOPROTEIN CD1B protein, length: 300 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 10 5671
95 % 7 11 5634 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 7 11 5651
70 % 8 13 3720
50 % 32 97 423
40 % 32 97 451
30 % 463 896 15
Entity #2 | Chains: B
B2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 361 616 2
95 % 389 660 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 392 669 4
70 % 482 912 4
50 % 492 934 3
40 % 492 934 7
30 % 492 934 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.