Sequence Similarity Clusters for the Entities in PDB 1GZP

Entity #1 | Chains: A
T-CELL SURFACE GLYCOPROTEIN CD1B protein, length: 300 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 10 5758
95 % 9 11 5710
90 % 9 11 5729
70 % 11 13 3772
50 % 68 97 433
40 % 68 97 456
30 % 776 907 15
Entity #2 | Chains: B
B2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 555 624 2
95 % 595 668 3
90 % 604 677 4
70 % 799 922 4
50 % 813 944 3
40 % 813 944 7
30 % 813 944 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5WL1 1 A T-cell surface glycoprotein CD1b 9606
2 5L2J 1 A T-cell surface glycoprotein CD1b 9606
3 5WKE 1 A T-cell surface glycoprotein CD1b 9606
4 3T8X 1 A, C T-cell surface glycoprotein CD1b UNP residues 19-298 9606
5 2H26 1 A T-cell surface glycoprotein CD1b extracellular domain of CD1b antigen 9606
6 5WKG 1 A T-cell surface glycoprotein CD1b 9606
7 1GZQ 1 A T-CELL SURFACE GLYCOPROTEIN CD1B RESIDUES 18-295 9606
8 5WKI 1 A T-cell surface glycoprotein CD1b 9606
9 1GZP 1 A T-CELL SURFACE GLYCOPROTEIN CD1B RESIDUES 18-295 9606
10 5L2K 1 A T-cell surface glycoprotein CD1b 9606
11 1UQS 1 A T-CELL SURFACE GLYCOPROTEIN CD1B FRAGMENT: RESIDUES 18-295 9606