Sequence Similarity Clusters for the Entities in PDB 1GZP

Entity #1 | Chains: A
T-CELL SURFACE GLYCOPROTEIN CD1B protein, length: 300 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 10182
95 % 5 7 8825 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 5 7 8757
70 % 7 9 4953
50 % 64 93 430
40 % 64 93 461
30 % 756 881 15
Entity #2 | Chains: B
B2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 542 607 2
95 % 582 651 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 0.9
PDBFlex
90 % 591 660 4
70 % 782 898 4
50 % 796 920 3
40 % 796 920 8
30 % 796 920 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3GMO 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-297 10090
2 5L2J 1 A T-cell surface glycoprotein CD1b 9606
3 3G08 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-298 10090
4 3GMP 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-297 10090
5 3GML 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-297 10090
6 3GMN 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-297 10090
7 3T1F 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-298 10090
8 3GMM 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-297 10090
9 3GMQ 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-297 10090
10 5TW2 1 A Antigen-presenting glycoprotein CD1d1 10090
11 3T8X 1 A, C T-cell surface glycoprotein CD1b UNP residues 19-298 9606
12 5J1A 1 A T-cell surface glycoprotein CD1a 9606
13 5FKP 1 A ANTIGEN-PRESENTING GLYCOPROTEIN CD1D1 10090
14 2H26 1 A T-cell surface glycoprotein CD1b extracellular domain of CD1b antigen 9606
15 2FIK 1 A T-cell surface glycoprotein CD1d1 extracellular domain of CD1d, residues 19-297 10090
16 2AKR 1 A, C T-cell surface glycoprotein CD1d1 extracellular domain, residues 19-297 10090
17 3GMR 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-297 10090
18 5EFI 1 A Antigen-presenting glycoprotein CD1d1 10090
19 3ILP 1 A T-cell surface glycoprotein CD1d1 UNP residues 19-298 10090
20 4X6F 1 A T-cell surface glycoprotein CD1a 9606
21 5TW5 1 A Antigen-presenting glycoprotein CD1d1 10090
22 2Q7Y 1 A, C T-cell surface glycoprotein CD1d1 residues 19-297 10090
23 4X6E 1 A T-cell surface glycoprotein CD1a 9606
24 3ILQ 1 C T-cell surface glycoprotein CD1d1 UNP residues 19-298 10090
25 5C9J 1 A T-cell surface glycoprotein CD1c,T-cell surface glycoprotein CD1b 9606
26 3QUY 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
27 3RUG 1 A, C Antigen-presenting glycoprotein CD1d1 extracellular domain 10090
28 3QUZ 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
29 1GZQ 1 A T-CELL SURFACE GLYCOPROTEIN CD1B RESIDUES 18-295 9606
30 1ONQ 1 A, C T-cell surface glycoprotein CD1a 9606
31 3L9R 1 A, C, E, G CD1b3 UNP residues 19-295 9913
32 4MX7 1 A Antigen-presenting glycoprotein CD1d1 CD1d ectdomain, UNP residues 19-297 10090
33 1Z5L 1 A, C T-cell surface glycoprotein CD1d antigen extracellular domain 10090
34 4WW2 3 C Antigen-presenting glycoprotein CD1d 9606
35 4WO4 1 A Antigen-presenting glycoprotein CD1d 9606
36 3AU1 1 A Antigen-presenting glycoprotein CD1d1 extracellular domain 10090
37 3MA7 1 A, C T-cell surface glycoprotein CD1d1 UNP RESIDUES 19-297 10090
38 4F7E 1 A CD1D antigen, d polypeptide UNP residues 129-405 9913
39 3QI9 1 A Antigen-presenting glycoprotein CD1d1 residues in UNP 19-297 10090
40 3HUJ 1 A, C T-cell surface glycoprotein CD1d UNP residues 21-295 9606
41 4X6C 1 A, C T-cell surface glycoprotein CD1a 9606
42 4EN3 1 C Antigen-presenting glycoprotein CD1d UNP residues 21-295 9606
43 4Y16 1 A Antigen-presenting glycoprotein CD1d1 Ectodomain, UNP residues 19-297 10090
44 2GAZ 1 A T-cell surface glycoprotein CD1d1 extracellular domain, residues 19-297 10090
45 3O8X 1 A Antigen-presenting glycoprotein CD1d1 residues 19-297 10090
46 4IRS 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-298 10090
47 3TA3 1 A Antigen-presenting glycoprotein CD1d1 Residues 19-297 10090
48 4MQ7 1 A Antigen-presenting glycoprotein CD1d, Cd1d1 protein human CD1d alpha1,2 domains fused with murine alpha3 domain 10090
49 3O9W 1 A Antigen-presenting glycoprotein CD1d1 10090
50 4X6D 1 A, C T-cell surface glycoprotein CD1a 9606
51 3ARB 1 A Antigen-presenting glycoprotein CD1d1 heavy chain 10090
52 4MNG 2 A, C Cd1d1 protein CD1d,CD1d 10090
53 4APQ 1 A ANTIGEN-PRESENTING GLYCOPROTEIN CD1D1 EXTRACELLULAR DOMAIN, RESIDUES 19-297 10090
54 3VWK 1 A Antigen-presenting glycoprotein CD1d UNP residues 21-295 9606
55 4IRJ 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-298 10090
56 3U0P 1 A, C, E Antigen-presenting glycoprotein CD1d 9606
57 4LHU 1 A Antigen-presenting glycoprotein CD1d 9606
58 1XZ0 1 A, C T-cell surface glycoprotein CD1a 9606
59 4ZAK 1 A Antigen-presenting glycoprotein CD1d1 10090
60 1ZHN 1 A CD1d1 antigen Self phospholipid copurified with protein 10090
61 4Y4K 1 A Antigen-presenting glycoprotein CD1d1 Ectodomain, UNP residues 19-297 10090
62 3ARE 1 A Antigen-presenting glycoprotein CD1d1 heavy chain 10090
63 3QUX 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
64 1GZP 1 A T-CELL SURFACE GLYCOPROTEIN CD1B RESIDUES 18-295 9606
65 3HE7 1 A T-cell surface glycoprotein CD1d1 extracellular domain 10090
66 3TVM 1 A, E Antigen-presenting glycoprotein CD1d1 residues 19-298 10090
67 3RTQ 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
68 3SCM 1 A Antigen-presenting glycoprotein CD1d1 extracellular domain, UNP residues 19-297 10090
69 4WWK 3 C Antigen-presenting glycoprotein CD1d 9606
70 4F7C 1 A, C CD1D antigen, d polypeptide UNP residues 129-405 9913
71 4EI5 1 A, E Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
72 3RZC 1 A Antigen-presenting glycoprotein CD1d1 19-298 10090
73 3UBX 1 A, D Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
74 3ARF 1 A Antigen-presenting glycoprotein CD1d1 heavy chain 10090
75 3ARD 1 A Antigen-presenting glycoprotein CD1d1 heavy chain 10090
76 4Y2D 1 A, E Antigen-presenting glycoprotein CD1d1 Ectodomain, UNP residues 19-297 10090
77 3HE6 1 A T-cell surface glycoprotein CD1d1 extracellular domain 10090
78 3TO4 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
79 1ZT4 1 A, C T-cell surface glycoprotein CD1d CD1d heavy chain 9606
80 3ARG 1 A Antigen-presenting glycoprotein CD1d1 heavy chain 10090
81 4Y4F 1 A, E Antigen-presenting glycoprotein CD1d1 Ectodomain, UNP residues 19-297 10090
82 5L2K 1 A T-cell surface glycoprotein CD1b 9606
83 3VWJ 1 A Antigen-presenting glycoprotein CD1d UNP residues 21-295 9606
84 3TZV 3 C Antigen-presenting glycoprotein CD1d 9606
85 1UQS 1 A T-CELL SURFACE GLYCOPROTEIN CD1B FRAGMENT: RESIDUES 18-295 9606
86 3SDX 1 A, C Antigen-presenting glycoprotein CD1d extracellular domain, UNP residues 24-295 9606
87 3TN0 1 A Antigen-presenting glycoprotein CD1d1 UNP residues 19-297 10090
88 2PO6 1 A, E T-cell surface glycoprotein CD1d 9606
89 3SDA 1 A Antigen-presenting glycoprotein CD1d1 extracellular domain, UNP residues 19-297 10090
90 3SDC 1 A Antigen-presenting glycoprotein CD1d1 extracellular domain, UNP residues 19-297 10090
91 4Y4H 1 A, E Antigen-presenting glycoprotein CD1d1 Ectodomain, UNP residues 19-297 10090
92 4ELM 1 A, C Antigen-presenting glycoprotein CD1d1 10090
93 3SDD 1 A Antigen-presenting glycoprotein CD1d1 extracellular domain, UNP residues 19-297 10090